Thesis Julian Freen-van Heeren

On 10 June  2020 Julian Freen-van Heeren defended his PhD thesis 'FISHing out the good guys: enhancing T cell effector function' at the University of Amsterdam.

Promotores: Prof RAW van Lier MD PhD and MC Wolkers PhD
Venue: Online without public

Summary

CD8+ T cells are critical to protect us from pathogenic microbes and to keep malignantly transformed cells in check. To do so, they produce various effector molecules, including the prototypical T cell cytokine interferon (IFN)-g. Cytokine production is (partially) regulated through post-transcriptional events, where regulatory elements in mRNA molecules determine mRNA half-life, location and translational rate. Together, these events influence the protein production by T cells. Here, we show that one class of post-transcriptional regulatory elements, AU-rich elements (AREs), regulate IFN-g protein production in human and murine T cells. Deleting the AREs in the IFNG gene resulted in increased IFN-g production by human T cells, and rendered murine T cells refractory to inhibitory signals in a tumor model, which significantly improved anti-tumor responses.

Furthermore, we investigated the pathways engaged upon Toll-like receptor (TLR) costimulation. TLR ligands engage different (post)-transcriptional mechanisms to enhance the cytokine production of both human and murine T cells. To investigate the relation between cytokine mRNA and protein, we here described a novel method for the simultaneous measurement thereof.

Lastly, we generated a novel CRISPR/Cas9-tool to genetically modify human T cells. This method does not make use of viral vectors and is electroporation-free. Therefore, it is potentially suitable for augmenting the effector function of T cells used in cellular therapies.

Together, the work in this thesis provides new tools to study and genetically manipulate T cells, and potentially provides novel angles to enhance T cell effector function for therapeutic applications.

Chapters

Chapter 1
General introduction

Chapter 2
Measuring T cell Responses by Flow Cytometry-Based Fluorescence In Situ Hybridization
Critical Reviews in Immunology (2018); 38 (2): 131-143. Abstract

Chapter 3
Combined Single-Cell Measurement of Cytokine mRNA and Protein in Immune Cells
Methods in Molecular Biology (2020). 2108: 259-271. Abstract

Chapter 4
Costimulation through TLR2 and TLR7 differently augments cytokine production of CD8+ T cells
Journal of Immunology (2019); 202 (3): 714-723. Abstract

Chapter 5
Relieving IFN-γ from post-transcriptional regulation elicits superior anti-tumor T cell responses
OncoImmunology (2019); 8 (2): e1532762. Abstract

Chapter 6
Human T cells employ conserved AU-rich elements to fine-tune IFN-γ production
European Journal of Immunology (2020, Feb). Abstract

Chapter 7
Developing TAT-Cas9, a novel electroporation-free tool for CRISPR-mediated genome editing in human T cells

Chapter 8
General discussion

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